Sequence Similarity Clusters for the Entities in PDB 1KKT

Entity #1 | Chains: A,B
Mannosyl-oligosaccharide alpha-1,2-mannosidase protein, length: 511 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 6233
95 % 2 5 6872 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 5 6861
70 % 2 5 6679
50 % 2 6 4515
40 % 2 6 4288
30 % 10 15 2312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures