Sequence Similarity Clusters for the Entities in PDB 1KKP

Entity #1 | Chains: A
Serine Hydroxymethyltransferase protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 14538
95 % 27 39 1414 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.2
PDBFlex
90 % 27 39 1435
70 % 28 40 1314
50 % 38 59 603
40 % 40 100 271
30 % 40 102 267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures