Sequence Similarity Clusters for the Entities in PDB 1KKP

Entity #1 | Chains: A
Serine Hydroxymethyltransferase protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 14892
95 % 27 39 1470 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.2
PDBFlex
90 % 27 39 1495
70 % 28 40 1366
50 % 38 59 619
40 % 40 104 263
30 % 40 106 261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures