Sequence Similarity Clusters for the Entities in PDB 1KKO

Entity #1 | Chains: A,B
3-METHYLASPARTATE AMMONIA-LYASE protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18156
95 % 1 2 16431 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 16124
70 % 1 2 15064
50 % 1 7 5162
40 % 1 7 4873
30 % 1 7 4439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures