Sequence Similarity Clusters for the Entities in PDB 1KKL

Entity #1 | Chains: A,B,C
HprK protein protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 3184
95 % 3 4 3498 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.7
PDBFlex
90 % 3 4 3566
70 % 3 4 3513
50 % 3 4 3428
40 % 3 4 3288
30 % 3 4 3044
Entity #2 | Chains: H,I,J
PHOSPHOCARRIER PROTEIN HPR protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14509
95 % 2 2 13611 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 13372
70 % 2 2 12537
50 % 2 2 11153
40 % 2 2 10021
30 % 2 2 8554

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures