Sequence Similarity Clusters for the Entities in PDB 1KKJ

Entity #1 | Chains: A
Serine Hydroxymethyltransferase protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14114
95 % 26 39 1360 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.2
PDBFlex
90 % 26 39 1381
70 % 27 40 1266
50 % 37 59 580
40 % 39 96 280
30 % 39 98 274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures