Sequence Similarity Clusters for the Entities in PDB 1KKE

Entity #1 | Chains: A,B,C
SIGMA 1 PROTEIN protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28300
95 % 1 1 23567 Flexibility: Medium
Max RMSD: 3.6, Avg RMSD: 3.3
PDBFlex
90 % 1 1 22778
70 % 1 1 20795
50 % 1 1 18000
40 % 1 1 16039
30 % 1 1 13721

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures