Sequence Similarity Clusters for the Entities in PDB 1KK8

Entity #1 | Chains: A
Myosin Heavy Chain, Striated muscle protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 3416
95 % 1 14 4191 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.9
PDBFlex
90 % 1 17 3323
70 % 1 21 2684
50 % 3 50 441
40 % 39 101 280
30 % 56 126 234
Entity #2 | Chains: B
Myosin Regulatory Light Chain, Striated adductor muscle protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 2601
95 % 3 18 3243 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 3 18 3291
70 % 5 24 2101
50 % 5 47 503
40 % 122 336 34
30 % 132 363 47
Entity #3 | Chains: C
Myosin Essential Light Chain,Striated adductor muscle protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 2820
95 % 5 24 2053 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 5 24 2104
70 % 5 24 2104
50 % 5 28 1796
40 % 123 336 34
30 % 133 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.