Sequence Similarity Clusters for the Entities in PDB 1KK8

Entity #1 | Chains: A
Myosin Heavy Chain, Striated muscle protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 3467
95 % 1 14 4248 Flexibility: High
Max RMSD: 27.4, Avg RMSD: 10.1
PDBFlex
90 % 1 17 3374
70 % 1 21 2717
50 % 3 50 446
40 % 39 101 284
30 % 56 126 238
Entity #2 | Chains: B
Myosin Regulatory Light Chain, Striated adductor muscle protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 2637
95 % 3 18 3293 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 3 18 3338
70 % 5 24 2122
50 % 5 47 507
40 % 123 339 39
30 % 133 366 49
Entity #3 | Chains: C
Myosin Essential Light Chain,Striated adductor muscle protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 2859
95 % 5 24 2081 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 5 24 2130
70 % 5 24 2125
50 % 5 28 1824
40 % 124 339 39
30 % 134 366 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.