Sequence Similarity Clusters for the Entities in PDB 1KK8

Entity #1 | Chains: A
Myosin Heavy Chain, Striated muscle protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 14 3347
95 % 1 14 4119 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 1 17 3274
70 % 1 21 2640
50 % 2 48 441
40 % 38 99 280
30 % 55 124 231
Entity #2 | Chains: B
Myosin Regulatory Light Chain, Striated adductor muscle protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 18 2549
95 % 3 18 3196 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 3 18 3241
70 % 5 24 2058
50 % 5 47 494
40 % 121 335 32
30 % 131 362 47
Entity #3 | Chains: C
Myosin Essential Light Chain,Striated adductor muscle protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 2765
95 % 5 24 2005 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 5 24 2056
70 % 5 24 2061
50 % 5 28 1769
40 % 122 335 32
30 % 132 362 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.