Sequence Similarity Clusters for the Entities in PDB 1KK7

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN, STRIATED MUSCLE protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 4349
95 % 8 14 4669 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 8 17 3764
70 % 10 21 2976
50 % 56 91 362
40 % 69 111 277
30 % 89 135 236
Entity #2 | Chains: Y
MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 18 3141
95 % 12 18 3449 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 12 18 3513
70 % 15 24 2216
50 % 18 47 540
40 % 212 361 41
30 % 267 432 42
Entity #3 | Chains: Z
MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 2064
95 % 15 22 2372 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 15 24 2199
70 % 15 24 2215
50 % 17 28 1914
40 % 213 361 41
30 % 268 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WDC 3 C SCALLOP MYOSIN PH 7.0 PROTEOLYTIC FRAGMENT, REGULATORY DOMAIN 31199
2 3JVT 3 C Myosin essential light chain, striated adductor muscle 31199
3 3PN7 3 C, F Myosin essential light chain 6577
4 3TS5 3 C, F Myosin essential light chain 6577
5 1KK8 3 C Myosin Essential Light Chain,Striated adductor muscle MYOSIN ESSENTIAL LIGHT CHAIN 31199
6 3TUY 3 C, F Myosin essential light chain 6577
7 1QVI 3 Z Myosin essential light chain, striated adductor muscle 31199
8 1B7T 3 Z MYOSIN ESSENTIAL LIGHT CHAIN PAPAIN DIGESTED, SUBFRAGMENT 1 (S1) 31199
9 3JTD 3 C Myosin essential light chain, striated adductor muscle 31199
10 1SCM 3 C MYOSIN ESSENTIAL LIGHT CHAIN 31199
11 1SR6 3 C Myosin essential light chain, striated adductor muscle 31199
12 1S5G 3 Z Myosin essential light chain, striated adductor muscle 31199
13 1L2O 3 C MYOSIN ESSENTIAL LIGHT CHAIN 31199
14 1KQM 3 C MYOSIN ESSENTIAL LIGHT CHAIN 31199
15 1KK7 3 Z MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE ESSENTIAL LIGHT CHAIN 31199
16 2OTG 3 C Myosin essential light chain 6577
17 2EC6 3 C Myosin essential light chain 6577
18 1KWO 3 C MYOSIN ESSENTIAL LIGHT CHAIN 31199
19 2OS8 3 C Myosin essential light chain Myosin ELC 6577
20 1DFL 3 X, Z MYOSIN HEAD ESSENTIAL LIGHT CHAIN 31199
21 1DFK 3 Z MYOSIN HEAD ESSENTIAL LIGHT CHAIN 31199
22 2W4T 3 Z MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN ESSENTIAL LIGHT CHAIN, ELC, STRIATED ADDUCTOR MUSCLE RESIDUES 5-155 31199
23 2W4V 3 Z MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN ESSENTIAL LIGHT CHAIN, ELC, STRIATED ADDUCTOR MUSCLE RESIDUES 5-155 31199
24 2W4W 3 Z MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN ESSENTIAL LIGHT CHAIN, ELC, STRIATED ADDUCTOR MUSCLE RESIDUES 5-155 31199