Sequence Similarity Clusters for the Entities in PDB 1KK7

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN, STRIATED MUSCLE protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 4617
95 % 8 14 4947 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 8 17 3962
70 % 10 21 3120
50 % 56 92 388
40 % 69 112 310
30 % 89 136 253
Entity #2 | Chains: Y
MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 18 3325
95 % 12 18 3628 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 12 18 3688
70 % 15 24 2339
50 % 18 47 572
40 % 218 372 47
30 % 276 451 43
Entity #3 | Chains: Z
MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 2188
95 % 15 22 2486 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 15 24 2335
70 % 15 24 2338
50 % 17 28 2013
40 % 219 372 47
30 % 277 451 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WDC 2 B SCALLOP MYOSIN PH 7.0 PROTEOLYTIC FRAGMENT, REGULATORY DOMAIN 31199
2 3JVT 2 B Myosin regulatory light chain, striated adductor muscle 31199
3 1KK8 2 B Myosin Regulatory Light Chain, Striated adductor muscle MYOSIN REGULATORY LIGHT CHAIN 31199
4 1QVI 2 Y Myosin regulatory light chain, striated adductor muscle 31199
5 1B7T 2 Y MYOSIN REGULATORY LIGHT CHAIN PAPAIN DIGESTED, SUBFRAGMENT 1 (S1) 31199
6 3JTD 2 B Myosin regulatory light chain, striated adductor muscle 31199
7 1SCM 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
8 1SR6 2 B Myosin regulatory light chain, striated adductor muscle 31199
9 1S5G 2 Y Myosin regulatory light chain, striated adductor muscle 31199
10 1L2O 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
11 1KQM 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
12 1KK7 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE REGULATORY LIGHT CHAIN 31199
13 1KWO 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
14 1DFL 2 W, Y MYOSIN HEAD REGULATORY LIGHT CHAIN 31199
15 1DFK 2 Y MYOSIN HEAD REGULATORY LIGHT CHAIN 31199
16 2W4T 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN REGULATORY LIGHT CHAIN, RLC, STRIATED ADDUCTOR MUSCLE RESIDUES 16-151 31199
17 2W4V 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN REGULATORY LIGHT CHAIN, RLC, STRIATED ADDUCTOR MUSCLE RESIDUES 16-151 31199
18 2W4W 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN REGULATORY LIGHT CHAIN, RLC, STRIATED ADDUCTOR MUSCLE RESIDUES 16-151 31199