Sequence Similarity Clusters for the Entities in PDB 1KK7

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN, STRIATED MUSCLE protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 4372
95 % 8 14 4704 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 8 17 3785
70 % 10 21 2990
50 % 56 91 364
40 % 69 111 279
30 % 89 135 237
Entity #2 | Chains: Y
MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 18 3161
95 % 12 18 3462 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 12 18 3525
70 % 15 24 2228
50 % 18 47 543
40 % 214 363 41
30 % 269 434 43
Entity #3 | Chains: Z
MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 2075
95 % 15 22 2382 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 15 24 2213
70 % 15 24 2227
50 % 17 28 1927
40 % 215 363 41
30 % 270 434 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WDC 2 B SCALLOP MYOSIN PH 7.0 PROTEOLYTIC FRAGMENT, REGULATORY DOMAIN 31199
2 3JVT 2 B Myosin regulatory light chain, striated adductor muscle 31199
3 1KK8 2 B Myosin Regulatory Light Chain, Striated adductor muscle MYOSIN REGULATORY LIGHT CHAIN 31199
4 1QVI 2 Y Myosin regulatory light chain, striated adductor muscle 31199
5 1B7T 2 Y MYOSIN REGULATORY LIGHT CHAIN PAPAIN DIGESTED, SUBFRAGMENT 1 (S1) 31199
6 3JTD 2 B Myosin regulatory light chain, striated adductor muscle 31199
7 1SCM 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
8 1SR6 2 B Myosin regulatory light chain, striated adductor muscle 31199
9 1S5G 2 Y Myosin regulatory light chain, striated adductor muscle 31199
10 1L2O 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
11 1KQM 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
12 1KK7 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE REGULATORY LIGHT CHAIN 31199
13 1KWO 2 B MYOSIN REGULATORY LIGHT CHAIN 31199
14 1DFL 2 W, Y MYOSIN HEAD REGULATORY LIGHT CHAIN 31199
15 1DFK 2 Y MYOSIN HEAD REGULATORY LIGHT CHAIN 31199
16 2W4T 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN REGULATORY LIGHT CHAIN, RLC, STRIATED ADDUCTOR MUSCLE RESIDUES 16-151 31199
17 2W4V 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN REGULATORY LIGHT CHAIN, RLC, STRIATED ADDUCTOR MUSCLE RESIDUES 16-151 31199
18 2W4W 2 Y MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE MYOSIN REGULATORY LIGHT CHAIN, RLC, STRIATED ADDUCTOR MUSCLE RESIDUES 16-151 31199