Sequence Similarity Clusters for the Entities in PDB 1KK7

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN, STRIATED MUSCLE protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 4494
95 % 8 14 4824 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 8 17 3883
70 % 10 21 3067
50 % 56 92 376
40 % 69 112 293
30 % 89 136 245
Entity #2 | Chains: Y
MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 18 3250
95 % 12 18 3544 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 12 18 3606
70 % 15 24 2288
50 % 18 47 556
40 % 218 372 45
30 % 275 445 44
Entity #3 | Chains: Z
MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 2137
95 % 15 22 2434 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 15 24 2275
70 % 15 24 2287
50 % 17 28 1977
40 % 219 372 45
30 % 276 445 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures