Sequence Similarity Clusters for the Entities in PDB 1KK7

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN, STRIATED MUSCLE protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 4349
95 % 8 14 4669 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.3
PDBFlex
90 % 8 17 3764
70 % 10 21 2976
50 % 56 91 362
40 % 69 111 277
30 % 89 135 236
Entity #2 | Chains: Y
MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 18 3141
95 % 12 18 3449 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.2
PDBFlex
90 % 12 18 3513
70 % 15 24 2216
50 % 18 47 540
40 % 212 361 41
30 % 267 432 42
Entity #3 | Chains: Z
MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 2064
95 % 15 22 2372 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 15 24 2199
70 % 15 24 2215
50 % 17 28 1914
40 % 213 361 41
30 % 268 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures