Sequence Similarity Clusters for the Entities in PDB 1KK7

Entity #1 | Chains: A
MYOSIN HEAVY CHAIN, STRIATED MUSCLE protein, length: 837 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 14 4284
95 % 8 14 4612 Flexibility: High
Max RMSD: 28.4, Avg RMSD: 13.2
PDBFlex
90 % 8 17 3710
70 % 10 21 2932
50 % 56 91 350
40 % 69 111 274
30 % 88 134 237
Entity #2 | Chains: Y
MYOSIN REGULATORY LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 18 3091
95 % 12 18 3399 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 12 18 3460
70 % 15 24 2178
50 % 18 47 538
40 % 212 361 40
30 % 267 432 41
Entity #3 | Chains: Z
MYOSIN ESSENTIAL LIGHT CHAIN, STRIATED ADDUCTOR MUSCLE protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 22 2023
95 % 15 22 2326 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 15 24 2170
70 % 15 24 2177
50 % 17 28 1883
40 % 213 361 40
30 % 268 432 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures