Sequence Similarity Clusters for the Entities in PDB 1KK1

Entity #1 | Chains: A
eIF2gamma protein, length: 410 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15456
95 % 1 7 10670 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 7 10519
70 % 1 7 9939
50 % 11 40 1186
40 % 11 40 1188
30 % 21 145 270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1KK1 1 A eIF2gamma 29292
2 1KJZ 1 A eIF2gamma 29292
3 1KK3 1 A eIF2gamma 29292
4 1KK0 1 A eIF2gamma 29292
5 1KK2 1 A eIF2gamma 29292
6 2D74 1 A Translation initiation factor 2 gamma subunit 2261
7 2DCU 1 A Translation initiation factor 2 gamma subunit 2261