Sequence Similarity Clusters for the Entities in PDB 1KK1

Entity #1 | Chains: A
eIF2gamma protein, length: 410 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15900
95 % 1 7 10961 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 7 10803
70 % 1 7 10251
50 % 11 40 1212
40 % 11 40 1212
30 % 21 148 273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4RD4 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
2 4RCZ 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
3 2C78 1 A ELONGATION FACTOR TU-A TUFA GENE 274 3.1.5.1 | Details
4 4RD1 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
5 4RD2 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
6 4RCY 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
7 5O8W 1 A Elongation factor 1-alpha 4932
8 4RJL 1 A Translation initiation factor 2 subunit gamma 2287
9 2C77 1 A ELONGATION FACTOR TU-B TUFA GENE 274 3.1.5.1 | Details
10 4RD0 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
11 4RD3 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
12 1F60 1 A ELONGATION FACTOR EEF1A EEF1A 4932
13 4LBW 1 A Elongation factor Tu-A 274
14 4PC3 1 A, B Elongation factor Tu 1 562
15 1EXM 1 A ELONGATION FACTOR TU (EF-TU) BINARY COMPLEX WITH GUANOSINE-5'-(BETA,GAMMA-IMIDO) TRIPHOSPHATE (GPPNHP) INTACT WILD-TYPE EF-TU 274
16 4H9G 1 A Elongation factor Tu-A 274 3.6.5.3 | Details
17 2B7C 1 A Elongation factor 1-alpha 4932
18 4M53 1 A Translation initiation factor 2 subunit gamma 2287
19 4RD6 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
20 4PC1 1 A, B Elongation factor Tu 562
21 1KK1 1 A eIF2gamma 29292
22 1SKQ 1 A, B Elongation factor 1-alpha 2287
23 1JNY 1 A, B Elongation factor 1-alpha 2287
24 4LBV 1 A Elongation factor Tu-A 274
25 6MIJ 1 A Elongation factor Tu 470
26 1KJZ 1 A eIF2gamma 29292
27 1KK3 1 A eIF2gamma 29292
28 1HA3 1 A, B ELONGATION FACTOR TU TERNARY COMPLEX WITH GUANOSINE DIPHOSPHATE AND AURODOX 274 3.1.5.1 | Details
29 1KK0 1 A eIF2gamma 29292
30 4P3Y 1 A Elongation factor Tu 562
31 5JBQ 1 A Elongation factor Tu 1 562
32 4M4S 1 A Translation initiation factor 2 subunit gamma 2287
33 4LC0 1 A Elongation factor Tu-A 274
34 4PC2 1 A, B Elongation factor Tu 562
35 1EFC 1 A, B PROTEIN (ELONGATION FACTOR) 562
36 4LBZ 1 A Elongation factor Tu-A 274
37 4PC6 1 A, B Elongation factor Tu 562
38 1G7C 1 A ELONGATION FACTOR 1-ALPHA 4932
39 1D2E 1 A, B, C, D ELONGATION FACTOR TU (EF-TU) 9913
40 4M2L 1 A Translation initiation factor 2 subunit gamma 2287
41 5W76 1 A Ancestral Elogation Factor N153 32630
42 3U6B 1 A, B Elongation factor Tu 1 562
43 5MI8 1 A, B Elongation factor Tu 1 562
44 4QFM 1 A Translation initiation factor 2 subunit gamma 2287
45 4J0Q 1 A, B, C, D, E Elongation factor Tu-A 303
46 1KK2 1 A eIF2gamma 29292
47 4NBS 1 A Translation initiation factor 2 subunit gamma 2287
48 2QN6 1 A Translation initiation factor 2 gamma subunit 2287
49 3PEN 1 A Translation initiation factor 2 subunit gamma 2287
50 5W75 1 A, B, C, D Elongation factor Tu 2337
51 3WY9 1 A, B Elongation factor 1-alpha 53953
52 1XB2 1 A Elongation factor Tu, mitochondrial 9913
53 3WXM 1 A, C, E, G Elongation factor 1-alpha 56636
54 1DG1 1 G, H ELONGATION FACTOR TU 562
55 6EZE 1 A, B Elongation factor Tu 2 562
56 3VMF 1 A Elongation factor 1-alpha 56636
57 3WYA 1 A Elongation factor 1-alpha 53953
58 1D8T 1 A, B ELONGATION FACTOR TU 562
59 1EFU 1 A, C ELONGATION FACTOR TU 562
60 4G5G 1 A Elongation factor Tu 1 562
61 4LBY 1 A Elongation factor Tu-A 274
62 1IJE 1 A elongation factor 1-alpha 4932
63 2BVN 1 A, B ELONGATION FACTOR TU 562 3.6.5.3 | Details
64 1S0U 1 A Translation initiation factor 2 gamma subunit 2190
65 5MI3 1 A, B Elongation factor Tu 1 Thr 391 is phosphorylated 562
66 4IW3 2 B, K Elongation factor Tu-A 303
67 1EFT 1 A ELONGATION FACTOR TU 271
68 5W7Q 1 A Consensus Elongation Factor 32630
69 5DSZ 1 A, B Translation initiation factor 2 subunit gamma 2287
70 3P26 1 A, B Elongation factor 1 alpha-like protein 4932
71 3U6K 1 A, B Elongation factor Tu 1 562
72 5OPD 1 A, B Elongation factor Tu 1 562
73 1B23 2 P ELONGATION FACTOR TU 271
74 3I1F 1 A, B Translation initiation factor 2 subunit gamma 2287
75 1R5B 1 A Eukaryotic peptide chain release factor GTP-binding subunit residues 196-662 4896
76 3SJZ 1 A Translation initiation factor 2 subunit gamma 2287
77 4C0S 1 A, B ELONGATION FACTOR 1-ALPHA 2 9986
78 1TTT 2 A, B, C OF ELONGATION FACTOR TU (EF-TU) 271
79 2B7B 1 A Elongation factor 1-alpha 4932
80 2PMD 1 A, B Translation initiation factor 2 gamma subunit 2287
81 4M0L 1 A, B, C, D, E, F Translation initiation factor 2 subunit gamma 2287
82 1ZUN 2 B sulfate adenylate transferase, subunit 1/adenylylsulfate kinase 251701
83 3U2Q 1 A Elongation factor Tu 1 562
84 1TUI 1 A, B, C ELONGATION FACTOR TU 271
85 3CW2 1 A, B, E, F Translation initiation factor 2 subunit gamma aIF2gamma subunit 2287
86 2PLF 1 A Translation initiation factor 2 gamma subunit 2287
87 3P27 1 A, B Elongation factor 1 alpha-like protein 4932
88 1AIP 1 A, B, E, F ELONGATION FACTOR TU 274
89 2D74 1 A Translation initiation factor 2 gamma subunit 2261
90 2AHO 1 A Translation initiation factor 2 gamma subunit 2287
91 2FX3 1 A Elongation factor Tu 562
92 4V8Q 59 BZ ELONGATION FACTOR TU PURIFIED USING RECOMBINANT TECHNIQUES 274
93 4V5L 25 AZ ELONGATION FACTOR TU 274
94 1R5N 1 A Eukaryotic peptide chain release factor GTP-binding subunit residues 196-662 4896
95 4Q7J 2 B, F Elongation factor Tu 1 562
96 4V5R 25 AZ, CZ ELONGATION FACTOR TU 274
97 4V5Q 25 AZ, CZ ELONGATION FACTOR TU 274
98 1IJF 1 A elongation factor 1-alpha 4932
99 4V5P 25 AZ, CZ ELONGATION FACTOR TU 274
100 1OB2 1 A ELONGATION FACTOR TU 562 3.6.5.3 | Details
101 5MI9 1 A, B Elongation factor Tu 1 562
102 4V5S 25 AZ, CZ ELONGATION FACTOR TU 274
103 4QHY 1 A Translation initiation factor 2 subunit gamma 2287
104 2QMU 1 A Translation initiation factor 2 gamma subunit 2287
105 4ZV4 1 A, B Elongation factor Tu 287
106 2DCU 1 A Translation initiation factor 2 gamma subunit 2261
107 1R5O 1 A Eukaryotic peptide chain release factor GTP-binding subunit residues 196-662 4896
108 1OB5 1 A, C, E ELONGATION FACTOR TU 271 3.6.5.3 | Details
109 3QSY 1 A Translation initiation factor 2 subunit gamma 2287
110 4PC7 1 A Elongation factor Tu 1 562
111 4V5G 25 AZ, CZ ELONGATION FACTOR TU-A 274 3.6.5.3 | Details
112 3V11 1 A Translation initiation factor 2 subunit gamma 2287
113 6FEC 22 S Eukaryotic translation initiation factor 2 subunit 3 9606
114 5WFK 58 z Elongation factor Tu 2 562
115 5WFS 58 z Elongation factor Tu 2 562
116 5WF0 58 z Elongation factor Tu 2 562
117 5WE4 58 z Elongation factor Tu 2 562
118 5WE6 58 z Elongation factor Tu 2 562
119 5WDT 58 z Elongation factor Tu 2 562
120 5UYK 59 Z Elongation factor Tu 2 562
121 5UYL 59 Z Elongation factor Tu 2 562
122 5UYM 59 Z Elongation factor Tu 2 562
123 5UYN 59 Z Elongation factor Tu 2 562
124 5UYP 59 Z Elongation factor Tu 2 562
125 5UYQ 59 Z Elongation factor Tu 2 562
126 5LZS 85 jj Elongation factor 1-alpha 1 9986
127 5K0Y 15 S eukaryotic initiation factor 2 Gamma subunit (eIF2-Gamma) 9986
128 5JB3 34 7 Translation initiation factor 2 subunit gamma aIF2-gamma model from Sulfolobus solfataricus (PDB code 3V11) used for fitting 29292
129 5JBH 34 7 aIF2-gamma aIF2-gamma model from Sulfolobus solfataricus (PDB code 3V11) used for fitting 29292
130 5AFI 25 z Elongation factor Tu 2 562
131 4D61 36 i EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-BINDING SUBUNIT ERF3A G-DOMAIN, UNP RESIDUES 210-635 9606
132 4CXG 3 A ELONGATION FACTOR 1A 9986
133 4CXH 3 A ELONGATION FACTOR 1A 9986
134 4CRN 1 P ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX FOR CHAIN P (ERF3) THE FIRST 254 AMINO ACIDS ARE MISSING. 4932
135 3J5Y 2 B Eukaryotic peptide chain release factor GTP-binding subunit ERF3A UNP residues 69-496 9606
136 4V6K 36 BC Elongation factor Tu 2 562
137 4V6L 3 AC Elongation factor Tu 2 562
138 4V68 27 AZ Elongation factor Tu-A 274
139 4V69 25 AZ Elongation factor Tu 562
140 3EQ3 1 X Elongation factor Tu 562
141 3EQ4 1 X Elongation factor Tu 562
142 3EP2 1 X Elongation factor Tu 562
143 1ZC8 11 Y Elongation factor Tu 274
144 1QZD 1 A Elongation factor Tu 562
145 1MJ1 4 A Elongation Factor Tu TAKEN FROM PDB ENTRY 1B23 562
146 1LS2 2 A Elongation Factor Tu 562
147 1ETU 1 A ELONGATION FACTOR TU 562
148 1EFM 1 A ELONGATION FACTOR TU 562