Sequence Similarity Clusters for the Entities in PDB 1KK1

Entity #1 | Chains: A
eIF2gamma protein, length: 410 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 15456
95 % 1 7 10670 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 7 10519
70 % 1 7 9939
50 % 11 40 1186
40 % 11 40 1188
30 % 21 145 270

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4RD4 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
2 4RCZ 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
3 2C78 1 A ELONGATION FACTOR TU-A TUFA GENE 274 3.1.5.1 | Details
4 4RD1 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
5 4RD2 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
6 4RCY 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
7 5O8W 1 A Elongation factor 1-alpha 4932
8 4RJL 1 A Translation initiation factor 2 subunit gamma 2287
9 2C77 1 A ELONGATION FACTOR TU-B TUFA GENE 274 3.1.5.1 | Details
10 4RD0 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
11 4RD3 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
12 1F60 1 A ELONGATION FACTOR EEF1A EEF1A 4932
13 4LBW 1 A Elongation factor Tu-A 274
14 4PC3 1 A, B Elongation factor Tu 1 562
15 1EXM 1 A ELONGATION FACTOR TU (EF-TU) BINARY COMPLEX WITH GUANOSINE-5'-(BETA,GAMMA-IMIDO) TRIPHOSPHATE (GPPNHP) INTACT WILD-TYPE EF-TU 274
16 4H9G 1 A Elongation factor Tu-A 274 3.6.5.3 | Details
17 2B7C 1 A Elongation factor 1-alpha 4932
18 4M53 1 A Translation initiation factor 2 subunit gamma 2287
19 4RD6 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
20 4PC1 1 A, B Elongation factor Tu 562
21 1KK1 1 A eIF2gamma 29292
22 1SKQ 1 A, B Elongation factor 1-alpha 2287
23 1JNY 1 A, B Elongation factor 1-alpha 2287
24 4LBV 1 A Elongation factor Tu-A 274
25 1KJZ 1 A eIF2gamma 29292
26 1KK3 1 A eIF2gamma 29292
27 1HA3 1 A, B ELONGATION FACTOR TU TERNARY COMPLEX WITH GUANOSINE DIPHOSPHATE AND AURODOX 274 3.1.5.1 | Details
28 1KK0 1 A eIF2gamma 29292
29 4P3Y 1 A Elongation factor Tu 562
30 5JBQ 1 A Elongation factor Tu 1 562
31 4M4S 1 A Translation initiation factor 2 subunit gamma 2287
32 4LC0 1 A Elongation factor Tu-A 274
33 4PC2 1 A, B Elongation factor Tu 562
34 1EFC 1 A, B PROTEIN (ELONGATION FACTOR) 562
35 4LBZ 1 A Elongation factor Tu-A 274
36 4PC6 1 A, B Elongation factor Tu 562
37 1G7C 1 A ELONGATION FACTOR 1-ALPHA 4932
38 1D2E 1 A, B, C, D ELONGATION FACTOR TU (EF-TU) 9913
39 4M2L 1 A Translation initiation factor 2 subunit gamma 2287
40 5W76 1 A Ancestral Elogation Factor N153 32630
41 3U6B 1 A, B Elongation factor Tu 1 562
42 5MI8 1 A, B Elongation factor Tu 1 562
43 4QFM 1 A Translation initiation factor 2 subunit gamma 2287
44 4J0Q 1 A, B, C, D, E Elongation factor Tu-A 303
45 1KK2 1 A eIF2gamma 29292
46 4NBS 1 A Translation initiation factor 2 subunit gamma 2287
47 2QN6 1 A Translation initiation factor 2 gamma subunit 2287
48 3PEN 1 A Translation initiation factor 2 subunit gamma 2287
49 5W75 1 A, B, C, D Elongation factor Tu 2337
50 3WY9 1 A, B Elongation factor 1-alpha 53953
51 1XB2 1 A Elongation factor Tu, mitochondrial 9913
52 3WXM 1 A, C, E, G Elongation factor 1-alpha 56636
53 1DG1 1 G, H ELONGATION FACTOR TU 562
54 3VMF 1 A Elongation factor 1-alpha 56636
55 3WYA 1 A Elongation factor 1-alpha 53953
56 1D8T 1 A, B ELONGATION FACTOR TU 562
57 1EFU 1 A, C ELONGATION FACTOR TU 562
58 4G5G 1 A Elongation factor Tu 1 562
59 4LBY 1 A Elongation factor Tu-A 274
60 1IJE 1 A elongation factor 1-alpha 4932
61 2BVN 1 A, B ELONGATION FACTOR TU 562 3.6.5.3 | Details
62 1S0U 1 A Translation initiation factor 2 gamma subunit 2190
63 5MI3 1 A, B Elongation factor Tu 1 Thr 391 is phosphorylated 562
64 4IW3 2 B, K Elongation factor Tu-A 303
65 1EFT 1 A ELONGATION FACTOR TU 271
66 5W7Q 1 A Consensus Elongation Factor 32630
67 5DSZ 1 A, B Translation initiation factor 2 subunit gamma 2287
68 3P26 1 A, B Elongation factor 1 alpha-like protein 4932
69 3U6K 1 A, B Elongation factor Tu 1 562
70 1B23 2 P ELONGATION FACTOR TU 271
71 3I1F 1 A, B Translation initiation factor 2 subunit gamma 2287
72 1R5B 1 A Eukaryotic peptide chain release factor GTP-binding subunit residues 196-662 4896
73 3SJZ 1 A Translation initiation factor 2 subunit gamma 2287
74 4C0S 1 A, B ELONGATION FACTOR 1-ALPHA 2 9986
75 1TTT 2 A, B, C OF ELONGATION FACTOR TU (EF-TU) 271
76 2B7B 1 A Elongation factor 1-alpha 4932
77 2PMD 1 A, B Translation initiation factor 2 gamma subunit 2287
78 4M0L 1 A, B, C, D, E, F Translation initiation factor 2 subunit gamma 2287
79 1ZUN 2 B sulfate adenylate transferase, subunit 1/adenylylsulfate kinase 251701
80 3U2Q 1 A Elongation factor Tu 1 562
81 1TUI 1 A, B, C ELONGATION FACTOR TU 271
82 3CW2 1 A, B, E, F Translation initiation factor 2 subunit gamma aIF2gamma subunit 2287
83 2PLF 1 A Translation initiation factor 2 gamma subunit 2287
84 3P27 1 A, B Elongation factor 1 alpha-like protein 4932
85 1AIP 1 A, B, E, F ELONGATION FACTOR TU 274
86 2D74 1 A Translation initiation factor 2 gamma subunit 2261
87 2AHO 1 A Translation initiation factor 2 gamma subunit 2287
88 2FX3 1 A Elongation factor Tu 562
89 4V8Q 59 BZ ELONGATION FACTOR TU PURIFIED USING RECOMBINANT TECHNIQUES 274
90 4V5L 25 AZ ELONGATION FACTOR TU 274
91 1R5N 1 A Eukaryotic peptide chain release factor GTP-binding subunit residues 196-662 4896
92 4Q7J 2 B, F Elongation factor Tu 1 562
93 4V5R 25 AZ, CZ ELONGATION FACTOR TU 274
94 4V5Q 25 AZ, CZ ELONGATION FACTOR TU 274
95 1IJF 1 A elongation factor 1-alpha 4932
96 4V5P 25 AZ, CZ ELONGATION FACTOR TU 274
97 1OB2 1 A ELONGATION FACTOR TU 562 3.6.5.3 | Details
98 5MI9 1 A, B Elongation factor Tu 1 562
99 4V5S 25 AZ, CZ ELONGATION FACTOR TU 274
100 4QHY 1 A Translation initiation factor 2 subunit gamma 2287
101 2QMU 1 A Translation initiation factor 2 gamma subunit 2287
102 4ZV4 1 A, B Elongation factor Tu 287
103 2DCU 1 A Translation initiation factor 2 gamma subunit 2261
104 1R5O 1 A Eukaryotic peptide chain release factor GTP-binding subunit residues 196-662 4896
105 1OB5 1 A, C, E ELONGATION FACTOR TU 271 3.6.5.3 | Details
106 3QSY 1 A Translation initiation factor 2 subunit gamma 2287
107 4PC7 1 A Elongation factor Tu 1 562
108 4V5G 25 AZ, CZ ELONGATION FACTOR TU-A 274 3.6.5.3 | Details
109 3V11 1 A Translation initiation factor 2 subunit gamma 2287
110 6FEC 22 S Eukaryotic translation initiation factor 2 subunit 3 9606
111 5WFK 58 z Elongation factor Tu 2 562
112 5WFS 58 z Elongation factor Tu 2 562
113 5WF0 58 z Elongation factor Tu 2 562
114 5WE4 58 z Elongation factor Tu 2 562
115 5WE6 58 z Elongation factor Tu 2 562
116 5WDT 58 z Elongation factor Tu 2 562
117 5UYK 59 Z Elongation factor Tu 2 562
118 5UYL 59 Z Elongation factor Tu 2 562
119 5UYM 59 Z Elongation factor Tu 2 562
120 5UYN 59 Z Elongation factor Tu 2 562
121 5UYP 59 Z Elongation factor Tu 2 562
122 5UYQ 59 Z Elongation factor Tu 2 562
123 5LZS 85 jj Elongation factor 1-alpha 1 9986
124 5K0Y 15 S eukaryotic initiation factor 2 Gamma subunit (eIF2-Gamma) 9986
125 5JB3 34 7 Translation initiation factor 2 subunit gamma aIF2-gamma model from Sulfolobus solfataricus (PDB code 3V11) used for fitting 29292
126 5JBH 34 7 aIF2-gamma aIF2-gamma model from Sulfolobus solfataricus (PDB code 3V11) used for fitting 29292
127 5AFI 25 z Elongation factor Tu 2 562
128 4D61 36 i EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-BINDING SUBUNIT ERF3A G-DOMAIN, UNP RESIDUES 210-635 9606
129 4CXG 3 A ELONGATION FACTOR 1A 9986
130 4CXH 3 A ELONGATION FACTOR 1A 9986
131 4CRN 1 P ERF3 IN RIBOSOME BOUND ERF1-ERF3-GDPNP COMPLEX FOR CHAIN P (ERF3) THE FIRST 254 AMINO ACIDS ARE MISSING. 4932
132 3J5Y 2 B Eukaryotic peptide chain release factor GTP-binding subunit ERF3A UNP residues 69-496 9606
133 4V6K 36 BC Elongation factor Tu 2 562
134 4V6L 3 AC Elongation factor Tu 2 562
135 4V68 27 AZ Elongation factor Tu-A 274
136 4V69 25 AZ Elongation factor Tu 562
137 3EQ3 1 X Elongation factor Tu 562
138 3EQ4 1 X Elongation factor Tu 562
139 3EP2 1 X Elongation factor Tu 562
140 1ZC8 11 Y Elongation factor Tu 274
141 1QZD 1 A Elongation factor Tu 562
142 1MJ1 4 A Elongation Factor Tu TAKEN FROM PDB ENTRY 1B23 562
143 1LS2 2 A Elongation Factor Tu 562
144 1ETU 1 A ELONGATION FACTOR TU 562
145 1EFM 1 A ELONGATION FACTOR TU 562