Sequence Similarity Clusters for the Entities in PDB 1KK1

Entity #1 | Chains: A
eIF2gamma protein, length: 410 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26657
95 % 1 7 10552 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 7 10427
70 % 1 7 9889
50 % 11 40 1152
40 % 11 40 1162
30 % 11 40 1141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4RD4 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
2 4RCZ 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
3 4RD1 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
4 4RD2 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
5 4RCY 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
6 4RJL 1 A Translation initiation factor 2 subunit gamma 2287
7 4RD0 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
8 4RD3 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
9 4M53 1 A Translation initiation factor 2 subunit gamma 2287
10 4RD6 1 A Translation initiation factor 2 subunit gamma aIF2-gamma subunit 2287
11 1KK1 1 A eIF2gamma 29292
12 1KJZ 1 A eIF2gamma 29292
13 1KK3 1 A eIF2gamma 29292
14 1KK0 1 A eIF2gamma 29292
15 4M4S 1 A Translation initiation factor 2 subunit gamma 2287
16 4M2L 1 A Translation initiation factor 2 subunit gamma 2287
17 4QFM 1 A Translation initiation factor 2 subunit gamma 2287
18 1KK2 1 A eIF2gamma 29292
19 4NBS 1 A Translation initiation factor 2 subunit gamma 2287
20 2QN6 1 A Translation initiation factor 2 gamma subunit 2287
21 3PEN 1 A Translation initiation factor 2 subunit gamma 2287
22 1S0U 1 A Translation initiation factor 2 gamma subunit 2190
23 5DSZ 1 A, B Translation initiation factor 2 subunit gamma 2287
24 3I1F 1 A, B Translation initiation factor 2 subunit gamma 2287
25 3SJZ 1 A Translation initiation factor 2 subunit gamma 2287
26 2PMD 1 A, B Translation initiation factor 2 gamma subunit 2287
27 4M0L 1 A, B, C, D, E, F Translation initiation factor 2 subunit gamma 2287
28 3CW2 1 A, B, E, F Translation initiation factor 2 subunit gamma aIF2gamma subunit 2287
29 2PLF 1 A Translation initiation factor 2 gamma subunit 2287
30 2D74 1 A Translation initiation factor 2 gamma subunit 2261
31 2AHO 1 A Translation initiation factor 2 gamma subunit 2287
32 4QHY 1 A Translation initiation factor 2 subunit gamma 2287
33 2QMU 1 A Translation initiation factor 2 gamma subunit 2287
34 2DCU 1 A Translation initiation factor 2 gamma subunit 2261
35 3QSY 1 A Translation initiation factor 2 subunit gamma 2287
36 3V11 1 A Translation initiation factor 2 subunit gamma 2287
37 6FEC 22 S Eukaryotic translation initiation factor 2 subunit 3 9606
38 5K0Y 15 S eukaryotic initiation factor 2 Gamma subunit (eIF2-Gamma) 9986
39 5JB3 34 7 Translation initiation factor 2 subunit gamma aIF2-gamma model from Sulfolobus solfataricus (PDB code 3V11) used for fitting 29292
40 5JBH 34 7 aIF2-gamma aIF2-gamma model from Sulfolobus solfataricus (PDB code 3V11) used for fitting 29292