Sequence Similarity Clusters for the Entities in PDB 1KJY

Entity #1 | Chains: A,C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 2458
95 % 38 45 759 Flexibility: Low
Max RMSD: 9.7, Avg RMSD: 1.7
PDBFlex
90 % 42 51 590
70 % 53 66 403
50 % 57 77 432
40 % 63 97 380
30 % 65 99 363
Entity #2 | Chains: B,D
REGULATOR OF G-PROTEIN SIGNALING 14 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10008
95 % 4 4 10070 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.7
PDBFlex
90 % 4 4 9946
70 % 4 4 9444
50 % 4 4 8551
40 % 4 4 7840
30 % 4 4 6924

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures