Sequence Similarity Clusters for the Entities in PDB 1KJY

Entity #1 | Chains: A,C
GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT protein, length: 325 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 2366
95 % 38 45 738 Flexibility: Low
Max RMSD: 9.6, Avg RMSD: 1.6
PDBFlex
90 % 42 51 562
70 % 53 66 393
50 % 57 77 413
40 % 63 97 347
30 % 65 99 339
Entity #2 | Chains: B,D
REGULATOR OF G-PROTEIN SIGNALING 14 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 9735
95 % 4 4 9795 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 4 4 9685
70 % 4 4 9195
50 % 4 4 8327
40 % 4 4 7638
30 % 4 4 6749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.