Sequence Similarity Clusters for the Entities in PDB 1KJV

Entity #1 | Chains: A
Mature alpha chain of major histocompatibility complex class I antigen (HEAVY CHAIN) protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53576
95 % 1 1 38202
90 % 1 1 36573
70 % 27 656 7
50 % 27 661 7
40 % 28 709 11
30 % 28 826 14
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 6984
95 % 1 6 7502
90 % 1 6 7465
70 % 35 856 5
50 % 36 876 4
40 % 36 876 9
30 % 36 876 13
Entity #3 | Chains: P
peptide NPR protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.