Sequence Similarity Clusters for the Entities in PDB 1KJV

Entity #1 | Chains: A
Mature alpha chain of major histocompatibility complex class I antigen (HEAVY CHAIN) protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52239
95 % 1 1 37227
90 % 1 1 35650
70 % 26 638 7
50 % 26 643 7
40 % 27 685 11
30 % 27 801 14
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 6786
95 % 1 6 7318
90 % 1 6 7288
70 % 34 831 5
50 % 35 851 5
40 % 35 851 9
30 % 35 851 12
Entity #3 | Chains: P
peptide NPR protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.