Sequence Similarity Clusters for the Entities in PDB 1KJH

Entity #1 | Chains: A,B
POL POLYPROTEIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 3061
95 % 431 590 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 465 652 3
70 % 484 679 5
50 % 492 705 5
40 % 502 715 9
30 % 504 717 14
Entity #2 | Chains: P
POL POLYPROTEIN protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures