Sequence Similarity Clusters for the Entities in PDB 1KJH

Entity #1 | Chains: A,B
POL POLYPROTEIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 102 123 106
95 % 102 123 133 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 468 659 3
70 % 485 683 5
50 % 493 709 5
40 % 503 719 8
30 % 505 721 12
Entity #2 | Chains: P
POL POLYPROTEIN protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures