Sequence Similarity Clusters for the Entities in PDB 1KJG

Entity #1 | Chains: A,B
POL POLYPROTEIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 2862
95 % 405 574 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 439 636 2
70 % 458 663 5
50 % 466 689 4
40 % 476 699 7
30 % 478 701 13
Entity #2 | Chains: P
GAG POLYPROTEIN protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.