Sequence Similarity Clusters for the Entities in PDB 1KJ1

Entity #1 | Chains: A,P
lectin I protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45585
95 % 1 3 19844 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 6 9516
70 % 2 7 6923
50 % 12 20 1300
40 % 20 34 661
30 % 21 38 570
Entity #2 | Chains: D,Q
lectin II protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45586
95 % 1 3 19842 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 6 9516
70 % 3 7 6923
50 % 13 20 1300
40 % 21 34 661
30 % 22 38 570

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.