Sequence Similarity Clusters for the Entities in PDB 1KIX

Entity #1 | Chains: D
5'-D(*T*TP*TP*TP*GP*GP*GP*G)-3' dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Telomere-Binding Protein alpha Subunit protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 15 3274
95 % 10 15 4017
90 % 10 15 4040
70 % 10 15 3961
50 % 10 15 3847
40 % 10 15 3694
30 % 10 15 3427

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.