Sequence Similarity Clusters for the Entities in PDB 1KIU

Entity #1 | Chains: A,C,E,G,I,K,M,O
CHAPERONE PROTEIN FimC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 3147
95 % 8 11 1308
90 % 8 11 1331
70 % 8 11 1355
50 % 9 12 1345
40 % 9 12 1363
30 % 38 41 562
Entity #2 | Chains: B,D,F,H,J,L,N,P
FimH PROTEIN protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 8074
95 % 13 14 1021
90 % 13 14 1038
70 % 13 14 1085
50 % 13 14 1126
40 % 13 14 1146
30 % 13 14 1124

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.