Sequence Similarity Clusters for the Entities in PDB 1KIU

Entity #1 | Chains: A,C,E,G,I,K,M,O
CHAPERONE PROTEIN FimC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 3169
95 % 8 11 1325
90 % 8 11 1345
70 % 8 11 1370
50 % 9 12 1359
40 % 9 12 1374
30 % 38 41 568
Entity #2 | Chains: B,D,F,H,J,L,N,P
FimH PROTEIN protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 8142
95 % 14 15 991
90 % 14 15 1012
70 % 14 15 1048
50 % 14 15 1084
40 % 14 15 1106
30 % 14 15 1086

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.