Sequence Similarity Clusters for the Entities in PDB 1KIL

Entity #1 | Chains: A
Synaptobrevin SNARE motif protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 3427
95 % 2 12 4163
90 % 2 12 4187
70 % 2 12 4112
50 % 2 12 3979
40 % 2 12 3807
30 % 4 14 2786
Entity #2 | Chains: B
Syntaxin SNARE motif short protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 18 1103
95 % 5 18 1530
90 % 5 18 1566
70 % 5 18 1599
50 % 6 19 1495
40 % 6 19 1523
30 % 7 21 1366
Entity #3 | Chains: C
SNAP-25 N-terminal SNARE motif protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 15 1286
95 % 4 15 1761
90 % 5 16 1651
70 % 5 16 1686
50 % 5 17 1647
40 % 5 17 1666
30 % 5 17 1611
Entity #4 | Chains: D
SNAP-25 C-terminal SNARE motif protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 13 1583
95 % 5 14 2019
90 % 5 14 2073
70 % 5 14 2083
50 % 5 14 2073
40 % 5 14 2076
30 % 6 15 1921
Entity #5 | Chains: E
Complexin I SNARE-complex binding region protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68444
95 % 1 1 47521
90 % 1 1 45210
70 % 1 1 39904
50 % 1 1 34177
40 % 1 1 30106
30 % 1 1 25427

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.