Sequence Similarity Clusters for the Entities in PDB 1KIG

Entity #1 | Chains: H
FACTOR XA protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60771
95 % 1 1 42858
90 % 1 1 40876
70 % 125 135 321
50 % 680 708 14
40 % 1737 1864 4
30 % 1753 1886 6
Entity #2 | Chains: L
FACTOR XA protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75581
95 % 1 1 52436
90 % 1 1 49689
70 % 1 1 43539
50 % 64 67 833
40 % 113 118 483
30 % 113 118 475
Entity #3 | Chains: I
ANTICOAGULANT PEPTIDE protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 25444
95 % 2 4 21651 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 2 4 21019
70 % 2 4 19289
50 % 2 4 16737
40 % 2 4 14916
30 % 2 4 12762

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures