Sequence Similarity Clusters for the Entities in PDB 1KIG

Entity #1 | Chains: H
FACTOR XA protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59893
95 % 1 1 42266
90 % 1 1 40327
70 % 125 135 311
50 % 673 698 14
40 % 1608 1720 4
30 % 1741 1870 6
Entity #2 | Chains: L
FACTOR XA protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74561
95 % 1 1 51754
90 % 1 1 49066
70 % 1 1 43012
50 % 64 67 819
40 % 113 118 473
30 % 113 118 466
Entity #3 | Chains: I
ANTICOAGULANT PEPTIDE protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 25023
95 % 2 4 21312 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.4
PDBFlex
90 % 2 4 20698
70 % 2 4 19008
50 % 2 4 16509
40 % 2 4 14716
30 % 2 4 12592

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures