Sequence Similarity Clusters for the Entities in PDB 1KHV

Entity #1 | Chains: A,B
RNA-DIRECTED RNA POLYMERASE protein, length: 516 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17694
95 % 1 2 16226 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 2 15924
70 % 1 2 14919
50 % 1 2 13193
40 % 1 2 11927
30 % 1 2 10373

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures