Sequence Similarity Clusters for the Entities in PDB 1KHU

Entity #1 | Chains: A,B,C,D
SMAD1 protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21481
95 % 1 1 18668 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 1 1 18242
70 % 4 8 4152
50 % 4 8 3999
40 % 4 8 3821
30 % 4 8 3558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures