Sequence Similarity Clusters for the Entities in PDB 1KHQ

Entity #1 | Chains: A
Papain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 8309
95 % 2 24 2046
90 % 2 24 2103
70 % 2 24 2105
50 % 25 166 146
40 % 32 206 127
30 % 35 236 123
Entity #2 | Chains: I
peptidic inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.