Sequence Similarity Clusters for the Entities in PDB 1KHP

Entity #1 | Chains: A
Papain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 9328
95 % 11 24 2329
90 % 11 24 2394
70 % 11 24 2398
50 % 108 195 142
40 % 126 235 126
30 % 146 274 116
Entity #2 | Chains: I
peptidic inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures