Sequence Similarity Clusters for the Entities in PDB 1KHP

Entity #1 | Chains: A
Papain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 8765
95 % 11 24 2159 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 11 24 2225
70 % 11 24 2225
50 % 99 172 153
40 % 117 212 131
30 % 135 248 123
Entity #2 | Chains: I
peptidic inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.