Sequence Similarity Clusters for the Entities in PDB 1KGO

Entity #1 | Chains: A,B,C,D
Ribonucleotide reductase protein R2F protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 3247
95 % 5 5 3558 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 3633
70 % 5 5 3568
50 % 11 17 1298
40 % 16 24 1043
30 % 16 24 1030

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures