Sequence Similarity Clusters for the Entities in PDB 1KGI

Entity #1 | Chains: A,B,C,D
TRANSTHYRETIN protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4091
95 % 1 5 2735 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.7
PDBFlex
90 % 1 5 2803
70 % 196 303 16
50 % 203 314 20
40 % 203 314 34
30 % 207 326 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures