Sequence Similarity Clusters for the Entities in PDB 1KGC

Entity #1 | Chains: D
T-cell receptor alpha chain protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15470
95 % 1 4 14517 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 11 3623
70 % 6 272 51
50 % 6 303 81
40 % 6 303 99
30 % 156 5606 1
Entity #2 | Chains: E
T-cell receptor beta chain protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20331
95 % 2 7 7000 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 9 5152
70 % 6 312 29
50 % 6 315 73
40 % 6 315 93
30 % 157 5606 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.