Sequence Similarity Clusters for the Entities in PDB 1KGC

Entity #1 | Chains: D
T-cell receptor alpha chain protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15789
95 % 1 4 14773 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 11 3706
70 % 6 274 58
50 % 6 305 82
40 % 6 305 99
30 % 168 5780 1
Entity #2 | Chains: E
T-cell receptor beta chain protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20767
95 % 2 7 7127 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 9 5258
70 % 6 314 29
50 % 6 317 75
40 % 6 317 96
30 % 169 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures