Sequence Similarity Clusters for the Entities in PDB 1KGC

Entity #1 | Chains: D
T-cell receptor alpha chain protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16059
95 % 1 4 15002 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 1 11 3755
70 % 12 286 56
50 % 13 334 76
40 % 13 334 98
30 % 185 5951 1
Entity #2 | Chains: E
T-cell receptor beta chain protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21095
95 % 2 7 7235 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 2 9 5341
70 % 13 343 25
50 % 13 346 67
40 % 13 346 89
30 % 186 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures