Sequence Similarity Clusters for the Entities in PDB 1KG9

Entity #1 | Chains: A
bacteriorhodopsin protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 77 367
95 % 19 120 247 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 19 121 261
70 % 19 121 298
50 % 19 136 262
40 % 19 136 277
30 % 24 194 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures