Sequence Similarity Clusters for the Entities in PDB 1KG8

Entity #1 | Chains: A
bacteriorhodopsin protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 77 320
95 % 32 120 236 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 32 121 250
70 % 32 121 281
50 % 34 136 254
40 % 34 136 270
30 % 45 194 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.