Sequence Similarity Clusters for the Entities in PDB 1KFY

Entity #1 | Chains: A,M
FUMARATE REDUCTASE FLAVOPROTEIN protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 2980
95 % 10 11 2634 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 10 11 2681
70 % 10 11 2659
50 % 10 11 2626
40 % 20 21 1195
30 % 70 72 447
Entity #2 | Chains: B,N
Fumarate reductase iron-sulfur protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 2074
95 % 10 11 2704 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 2751
70 % 10 11 2725
50 % 10 11 2686
40 % 10 11 2654
30 % 65 67 471
Entity #3 | Chains: C,O
FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 2452
95 % 10 11 2752 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 10 11 2796
70 % 10 11 2760
50 % 10 11 2726
40 % 10 11 2696
30 % 10 11 2516
Entity #4 | Chains: D,P
FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 2112
95 % 10 11 2757 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 10 11 2801
70 % 10 11 2765
50 % 10 11 2731
40 % 10 11 2702
30 % 10 11 2521

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.