Sequence Similarity Clusters for the Entities in PDB 1KFY

Entity #1 | Chains: A,M
FUMARATE REDUCTASE FLAVOPROTEIN protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3077
95 % 10 11 2708 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 10 11 2752
70 % 10 11 2732
50 % 10 11 2700
40 % 20 21 1225
30 % 70 72 461
Entity #2 | Chains: B,N
Fumarate reductase iron-sulfur protein protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 2146
95 % 10 11 2782 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 2826
70 % 10 11 2798
50 % 10 11 2759
40 % 10 11 2720
30 % 65 67 486
Entity #3 | Chains: C,O
FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 2533
95 % 10 11 2828 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 10 11 2869
70 % 10 11 2831
50 % 10 11 2797
40 % 10 11 2763
30 % 10 11 2588
Entity #4 | Chains: D,P
FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 2183
95 % 10 11 2833 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 10 11 2875
70 % 10 11 2836
50 % 10 11 2801
40 % 10 11 2768
30 % 10 11 2592

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.