Sequence Similarity Clusters for the Entities in PDB 1KFN

Entity #1 | Chains: A
MAJOR OUTER MEMBRANE LIPOPROTEIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48245
95 % 1 3 23692 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 3 5 7815
70 % 5 8 3349
50 % 5 8 3273
40 % 5 8 3160
30 % 5 8 2918

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures