Sequence Similarity Clusters for the Entities in PDB 1KFM

Entity #1 | Chains: A
MAJOR OUTER MEMBRANE LIPOPROTEIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72475
95 % 3 3 24732 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 5 5 7976
70 % 8 8 3209
50 % 8 8 3133
40 % 8 8 3056
30 % 8 8 2863

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.