Sequence Similarity Clusters for the Entities in PDB 1KFM

Entity #1 | Chains: A
MAJOR OUTER MEMBRANE LIPOPROTEIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73361
95 % 3 3 25036 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 5 5 8076
70 % 8 8 3261
50 % 8 8 3172
40 % 8 8 3090
30 % 8 8 2896

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures