Sequence Similarity Clusters for the Entities in PDB 1KFJ

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 48 770
95 % 28 61 803 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.6
PDBFlex
90 % 28 61 839
70 % 28 65 760
50 % 28 68 678
40 % 30 93 321
30 % 30 95 326
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE BETA CHAIN protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 31 1310
95 % 28 63 776 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 28 63 803
70 % 28 64 827
50 % 32 85 324
40 % 32 85 345
30 % 32 86 344

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.