Sequence Similarity Clusters for the Entities in PDB 1KFE

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 37872
95 % 29 61 811 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 29 61 848
70 % 29 65 767
50 % 29 68 686
40 % 31 93 332
30 % 31 95 332
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE BETA CHAIN protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 31 1338
95 % 29 63 784 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 29 63 813
70 % 29 64 834
50 % 33 85 335
40 % 33 85 352
30 % 33 86 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.