Sequence Similarity Clusters for the Entities in PDB 1KFC

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36860
95 % 11 61 800 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 11 61 834
70 % 11 65 748
50 % 11 68 653
40 % 12 93 314
30 % 12 95 323
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE BETA CHAIN protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 31 1294
95 % 11 63 774 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 11 63 800
70 % 11 64 824
50 % 12 85 316
40 % 12 85 336
30 % 12 86 338

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.