Sequence Similarity Clusters for the Entities in PDB 1KFB

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE ALPHA CHAIN protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37744
95 % 33 61 809 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 33 61 846
70 % 33 65 768
50 % 33 68 687
40 % 35 93 332
30 % 35 95 333
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE BETA CHAIN protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 31 1331
95 % 33 63 782 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 33 63 810
70 % 33 64 833
50 % 37 85 333
40 % 37 85 352
30 % 37 86 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.