Sequence Similarity Clusters for the Entities in PDB 1KF9

Entity #1 | Chains: A,D
PHAGE DISPLAY DERIVED VARIANT HUMAN GROWTH HORMONE protein, length: 191 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 27914
95 % 2 2 23228 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.7
PDBFlex
90 % 6 9 7023
70 % 7 10 6194
50 % 7 10 5791
40 % 7 10 5423
30 % 7 10 4866
Entity #2 | Chains: B,C,E,F
EXTRACELLULAR DOMAIN HUMAN GROWTH HORMONE RECEPTOR (1-238) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 8853
95 % 4 5 7690 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 4 5 7648
70 % 4 5 7452
50 % 4 5 6855
40 % 4 5 6369
30 % 4 5 5690

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.