Sequence Similarity Clusters for the Entities in PDB 1KF6

Entity #1 | Chains: A,M
FUMARATE REDUCTASE FLAVOPROTEIN protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2740
95 % 1 12 2407 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 1 12 2473
70 % 1 12 2460
50 % 1 12 2449
40 % 5 22 1190
30 % 26 73 462
Entity #2 | Chains: B,N
FUMARATE REDUCTASE IRON-SULFUR PROTEIN protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 1945
95 % 1 12 2533 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 1 12 2593
70 % 1 12 2576
50 % 1 12 2551
40 % 1 12 2512
30 % 21 68 484
Entity #3 | Chains: C,O
FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 2234
95 % 1 12 2603 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 12 2657
70 % 1 12 2646
50 % 1 12 2610
40 % 1 12 2561
30 % 1 12 2424
Entity #4 | Chains: D,P
FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 2038
95 % 1 12 2619 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 12 2673
70 % 1 12 2658
50 % 1 12 2620
40 % 1 12 2571
30 % 1 12 2430

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures