Sequence Similarity Clusters for the Entities in PDB 1KF6

Entity #1 | Chains: A,M
FUMARATE REDUCTASE FLAVOPROTEIN protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 2462
95 % 2 13 2319 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 2 13 2378
70 % 2 13 2386
50 % 2 13 2363
40 % 7 24 1138
30 % 28 75 459
Entity #2 | Chains: B,N
FUMARATE REDUCTASE IRON-SULFUR PROTEIN protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 2027
95 % 1 12 2621 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 1 12 2677
70 % 1 12 2662
50 % 1 12 2637
40 % 1 12 2593
30 % 21 68 496
Entity #3 | Chains: C,O
FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 2312
95 % 1 12 2692 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 12 2745
70 % 1 12 2732
50 % 1 12 2699
40 % 1 12 2646
30 % 1 12 2500
Entity #4 | Chains: D,P
FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 2126
95 % 1 12 2708 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 12 2762
70 % 1 12 2746
50 % 1 12 2709
40 % 1 12 2656
30 % 1 12 2507

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures