Sequence Similarity Clusters for the Entities in PDB 1KF6

Entity #1 | Chains: A,M
FUMARATE REDUCTASE FLAVOPROTEIN protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 3041
95 % 1 11 2676 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 1 11 2720
70 % 1 11 2702
50 % 1 11 2670
40 % 5 21 1217
30 % 26 72 455
Entity #2 | Chains: B,N
FUMARATE REDUCTASE IRON-SULFUR PROTEIN protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 11 2117
95 % 1 11 2745
90 % 1 11 2789
70 % 1 11 2765
50 % 1 11 2727
40 % 1 11 2685
30 % 21 67 477
Entity #3 | Chains: C,O
FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 2500
95 % 1 11 2792 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 11 2833
70 % 1 11 2799
50 % 1 11 2766
40 % 1 11 2726
30 % 1 11 2554
Entity #4 | Chains: D,P
FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 2154
95 % 1 11 2797 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 11 2839
70 % 1 11 2804
50 % 1 11 2771
40 % 1 11 2732
30 % 1 11 2559

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.