Sequence Similarity Clusters for the Entities in PDB 1KF6

Entity #1 | Chains: A,M
FUMARATE REDUCTASE FLAVOPROTEIN protein, length: 602 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 3072
95 % 1 11 2703 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.8
PDBFlex
90 % 1 11 2748
70 % 1 11 2727
50 % 1 11 2691
40 % 5 21 1223
30 % 26 72 461
Entity #2 | Chains: B,N
FUMARATE REDUCTASE IRON-SULFUR PROTEIN protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 2140
95 % 1 11 2775 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 1 11 2820
70 % 1 11 2792
50 % 1 11 2749
40 % 1 11 2710
30 % 21 67 486
Entity #3 | Chains: C,O
FUMARATE REDUCTASE 15 KDA HYDROPHOBIC PROTEIN protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 2527
95 % 1 11 2821 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 11 2863
70 % 1 11 2825
50 % 1 11 2787
40 % 1 11 2752
30 % 1 11 2580
Entity #4 | Chains: D,P
FUMARATE REDUCTASE 13 KDA HYDROPHOBIC PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 2177
95 % 1 11 2826 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 1 11 2869
70 % 1 11 2830
50 % 1 11 2792
40 % 1 11 2758
30 % 1 11 2585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.