Sequence Similarity Clusters for the Entities in PDB 1KEX

Entity #1 | Chains: A
Neuropilin-1 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 11 2653
95 % 8 11 3315 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 8 11 3361
70 % 8 11 3315
50 % 9 13 2499
40 % 13 26 1318
30 % 15 30 1195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures