Sequence Similarity Clusters for the Entities in PDB 1KER

Entity #1 | Chains: A,B
dTDP-D-glucose 4,6-dehydratase protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8489
95 % 4 4 8845 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 4 8773
70 % 4 4 8441
50 % 4 4 7702
40 % 8 12 2326
30 % 51 74 328

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures