Sequence Similarity Clusters for the Entities in PDB 1KEL

Entity #1 | Chains: L
28B4 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40719
95 % 36 146 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 40 156 148
70 % 394 2346 1
50 % 807 4752 1
40 % 807 4752 1
30 % 876 5606 1
Entity #2 | Chains: H
28B4 FAB protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40619
95 % 1 2 31051 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 15 38 1107
70 % 394 2299 2
50 % 808 4752 1
40 % 808 4752 1
30 % 877 5606 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4TRP 2 L Light chain of monoclonal antibody against neuroblastoma associated antigen 10090
2 4TUL 2 L Light chain of monoclonal antibody against neuroblastoma associated antigen 10090
3 3IFL 1 L 12A11 FAB antibody light chain 10090
4 4TPR 1 L If kappa light chain 10090
5 3IFN 2 L 12A11 FAB antibody light chain 10090
6 4TUO 2 B, D Light chain of monoclonal antibody against neuroblastoma associated antigen 10090
7 4TQE 1 L If kappa light chain 10090
8 4TUK 2 L Light chain of monoclonal antibody against neuroblastoma associated antigen 10090
9 5MYK 1 A Fab c#17 light chain 10090
10 5JUE 1 L light chain of UIC2 Fab 10090
11 3UO1 2 L ANTI-MHC-I MONOCLONAL ANTIBODY, 64-3-7 L CHAIN 10090
12 2IPU 1 K, L IgG2a Fab fragment Heavy Chain 10090
13 3WHX 2 B mAb Fab L fragment 10090
14 3BAE 1 L WO2 IgG2a Fab fragment Light Chain Kappa 10090
15 3WIF 2 B mAb Fab L fragment 10090
16 3V4U 2 L ANTI-MHC-I MONOCLONAL ANTIBODY, 64-3-7 L CHAIN 10090
17 3UYR 2 L antibody Fab light chain 10090
18 3V52 2 L ANTI-MHC-I MONOCLONAL ANTIBODY, 64-3-7 L CHAIN 10090
19 2DQU 1 L IMMUNOGLOBULIN 6D9 FAB FRAGMENT 10090
20 1YNL 1 L Ig gamma light chain 10090
21 5EPM 2 B, F Antibody Fab fragment light chain 10090
22 2DQT 1 L IMMUNOGLOBULIN 6D9 FAB FRAGMENT 10090
23 1ZEA 1 L monoclonal anti-cholera toxin IGG1 KAPPA antibody, L chain 10090
24 4P3C 2 L Light Chain Fab fragment of antibody LEM-2/15 10090
25 3WFH 2 B mAb Fab L fragment 10090
26 1FLR 1 L 4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT 10090
27 4P3D 2 B, L Light Chain Fab fragment of antibody LEM-2/15 10090
28 2OK0 2 L Fab ED10 light chain 10090
29 4TUJ 2 B, D Light chain of monoclonal antibody against neuroblastoma associated antigen 10090
30 1JGU 1 L Antibody Light Chain 10090
31 1T2Q 1 L Fab NNA7 Heavy Chain 10090
32 2A77 1 L Immunoglobulin Light Chain 10090
33 1F3D 1 J, L CATALYTIC ANTIBODY 4B2 LIGHT CHAIN - FAB FRAGMENT 10090
34 1PZ5 1 A Light chain of Fab (SYA/J6) 10090
35 1JGV 1 L Antibody Light Chain 10090
36 1KEL 1 L 28B4 FAB THIS PROTEIN IS A FAB FRAGMENT PRODUCED UPON THE DIGESTION OF FULL-LENGTH MURINE MONOCLONAL ANTIBODY BY PAPAIN VARIABLE REGIONS OF LIGHT AND HEAVY CHAINS 10090
37 2IPT 1 L IgG2a Fab fragment Heavy Chain 10090
38 2HKF 1 L Immunoglobulin Light chain Fab fragment 10090
39 5EOQ 2 L Anti vaccinia virus A27 antibody Fab 1G6 light chain 10090
40 3FO9 1 A, L Immunoglobulin IGG2A - light chain light chain of 33F12 Fab' fragment 10090
41 3EYS 1 L If kappa light chain 10090
42 3WE6 2 B mAb Fab L fragment 10090
43 1QKZ 3 L ANTIBODY FAB 10090
44 2G60 1 L anti-FLAG M2 Fab light chain 10090
45 3IFO 2 B, L 10D5 FAB antibody light chain 10090
46 4M7J 2 L S25-26 Fab (Igg1k) light chain 10090
47 1LO0 1 L, X If kappa light chain Fab fragment 10090
48 1LO2 1 L, X If kappa light chain Fab fragment 10090
49 2D03 1 L anti-glycophorin A type N immunoglobulin light chain 10090
50 3GNM 1 L JAA-F11 Fab Antibody Fragment, Light Chain 10090
51 1TET 1 L IGG1 TE33 FAB (LIGHT CHAIN) 10090
52 5T6P 1 A, C Fab fragment AR20.5 - Light Chain antibody Fab fragment 10090
53 5B6F 1 A, C, E, G anti-leukotriene C4 monoclonal antibody immunoglobulin kappa light chain 10090
54 1C1E 1 L CATALYTIC ANTIBODY 1E9 (LIGHT CHAIN) FAB FRAGMENT 10090
55 2R0Z 1 L IgG2a Fab fragment light chain light chain 10090
56 1KEM 1 L 28B4 FAB THIS PROTEIN IS A FAB FRAGMENT PRODUCED UPON THE DIGESTION OF FULL-LENGTH MURINE MONOCLONAL ANTIBODY BY PAPAIN VARIABLE REGIONS OF LIGHT AND HEAVY CHAINS 10090
57 2IQA 1 A, L IgG2a Fab fragment PFA2 Kappa light chain 10090
58 5DLM 2 L, M Light chain of monoclonal antibody 10090
59 5MY4 1 A Fab c#17 light chain 10090
60 1YNK 1 L immunoglobulin kappa light chain 10090
61 5T78 1 A, C Fab fragment AR20.5 - Light Chain antibody Fab fragment 10090
62 4M93 1 C, L S25-26 Fab (IgG1k) light chain 10090
63 2PCP 1 A, C IMMUNOGLOBULIN COMPLEXED WITH 1-(1-PHENYLCYCLOHEXYL) PIPERIDINE (PCP, OR PHENCYCLIDINE) FAB 10090
64 1AXT 1 L IMMUNOGLOBULIN IGG2A FAB' FRAGMENT 33F12 10090
65 1NBV 1 L IGG2B-KAPPA BV04-01 FAB (LIGHT CHAIN) 10090
66 2HKH 1 L Immunoglobulin Light chain Fab fragment 10090
67 2Z4Q 1 A anti egfr antibody fab, light chain 10090
68 1MRE 1 L IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN) 10090
69 2CGR 1 L IGG2B-KAPPA NC6.8 FAB (LIGHT CHAIN) 10090
70 1MRD 1 L IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN) 10090
71 4LQF 3 L Murine IgG2b A2C7 Light chain Fab domain 10090
72 4AEI 3 L, M, N FAB ANTIBODY LIGHT CHAIN VARIABLE DOMAIN 10090
73 1MRF 1 L IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN) 10090
74 2AI0 1 L, M, N, O Immunoglobulin Light Chain kappa 10090
75 3MCK 1 A, L C705 MONOCLONAL LIGHT CHAIN 10090
76 1T66 1 C, L immunoglobulin light chain FAB 10090
77 2H1P 1 L 2H1 FAB 10090
78 4OCX 2 L Fab ADD056 Light Chain 10090
79 1LO3 1 L, X If kappa light chain Fab fragment 10090
80 1MRC 1 L IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN) 10090
81 3IET 1 A, C Immunoglobulin light chain (IgG2a) 10090
82 1IGJ 1 A, C IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN) 10090
83 2DTM 1 L IMMUNOGLOBULIN 6D9 FAB FRAGMENT 10090
84 2IQ9 1 L IgG2a Fab fragment PFA2 Kappa light chain 10090
85 1M7D 1 A light chain of the monoclonal antibody Fab SYA/J6 10090
86 1EHL 2 L ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN) 10090
87 1KEG 2 L Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain) 10090
88 4HXB 1 L 6B9 FAB LIGHT CHAIN 10090
89 2DDQ 2 L R310 antibody light chain 10090
90 4MA1 2 C, F, L S25-26 Fab (IgG1k) light chain 10090
91 4HDI 1 A, L Kappa light chain variable region, Anti-colorectal carcinoma light chain 10090
92 1I9J 1 L RECOMBINANT MONOCLONAL ANTI-TESTOSTERONE FAB FRAGMENT LIGHT CHAIN 10090
93 2VQ1 1 A, E IGKV1-117 PROTEIN ANTIGEN BINDING FRAGMENT 10090
94 1IGI 1 L IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN) 10090
95 1PLG 1 L IGG2A=KAPPA= FAB FRAGMENT THAT BINDS POLYSIALIC ACID 10090
96 1MPA 1 L MN12H2 IGG2A-KAPPA FAB FRAGMENT 10090
97 3IF1 1 A, C Immunoglobulin light chain (IgG2a) 10090
98 2JEL 1 L JEL42 FAB FRAGMENT 10090
99 4QXU 1 L anti_MT1-MMP Light chain 10090
100 3EYU 1 L If kappa light chain 10090
101 2R0W 1 L IgG2a Fab fragment light chain light chain 10090
102 2UYL 1 A, M, V, X MONOCLONAL ANTIBODY F-22-30 10090
103 4OUU 2 A, L anti_MT1-MMP light chain 10090
104 1CBV 2 L PROTEIN (FAB (BV04-01) AUTOANTIBODY-LIGHT CHAIN) 10090
105 2MPA 1 L MN12H2 IGG2A-KAPPA, light chain FAB FRAGMENT 10090
106 2A1W 1 L, M immunoglobulin light chain kappa Fab fragment, light chain 10090
107 1M7I 1 A light chain of the monoclonal antibody Fab SYA/J6 10090
108 1LO4 1 L If kappa light chain Fab fragment 10090
109 1IGF 1 L, M IGG1-KAPPA B13I2 FAB (LIGHT CHAIN) 10090
110 4OCY 2 L Fab ADD058 Light Chain 10090
111 1I9I 1 L RECOMBINANT MONOCLONAL ANTI-TESTOSTERONE FAB FRAGMENT LIGHT CHAIN 10090
112 2GK0 1 A, L Catalytic elimination antibody 13G5 light chain Fab fragment 10090
113 1RMF 1 L IGG2A-KAPPA R6.5 FAB (LIGHT CHAIN) 10090
114 1MNU 1 L PROTEIN (IGG2A-KAPPA ANTIBODY MN12H2 (LIGHT CHAIN)) FAB FRAGMENT 10090
115 1CGS 1 L IGG2B-KAPPA NC6.8 FAB (LIGHT CHAIN) 10090
116 5H35 2 B, G, I Fab Light Chain 10090
117 4F37 3 K, L Fab WO2 anti-amyloid-beta antibody Fab fragment 10090
118 2GJZ 1 A, L Catalytic elimination antibody 13G5 light chain Fab fragment 10090
119 2OJZ 1 L, M Fab ED10 light chain 10090
120 1DBB 1 L IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 10090
121 1CLZ 1 L IGG FAB (IGG3, KAPPA) COMPLEXED WITH LEWIS Y NONOATE METHYL ESTER FRAGMENT (MBR96) 10090
122 1QFU 3 L PROTEIN (IMMUNOGLOBULIN IGG1-KAPPA ANTIBODY (LIGHT CHAIN)) FAB FRAGMENT 10090
123 1DBJ 1 L IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 10090
124 4FAB 1 L IGG2A-KAPPA 4-4-20 FAB (LIGHT CHAIN) 10090
125 1DBA 1 L IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 10090
126 3VW3 1 L Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain) 10090
127 1DBM 1 L IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 10090
128 1CL7 1 L PROTEIN (IGG1 ANTIBODY 1696 (light chain)) FAB 10090
129 4M7Z 2 C, L S25-26 Fab (Igg1k) Light Chain 10090
130 3NZ8 2 B, L Mouse anti V3 antibody 7C8 Fab, light chain Fab 10090
131 2DBL 1 L IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 10090
132 2IGF 1 L IGG1-KAPPA B13I2 FAB (LIGHT CHAIN) 10090
133 1M71 1 A light chain of the monoclonal antibody Fab SYA/J6 10090
134 4HZL 2 B, L Fab light chain 10090
135 4Q0X 2 L mAb 12 light chain Fab 10090
136 1DBK 1 L IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 10090
137 4U6H 2 B, D Light chain of murine anti-vaccinia L1 IgG2a antibody M12B9 10090
138 5T1D 5 L E1D1 IgG2a light chain 10090
139 1FPT 2 L IGG2A-KAPPA C3 FAB (LIGHT CHAIN) 10090
140 3IFP 2 B, D, F, L 12B4 FAB antibody light chain 10090
141 1NAK 1 L, M Fab 83.1 - light chain 10090
142 1KFA 1 L, M monoclonal antibody light chain residues 1-217 10090
143 5Y9F 2 K, M, O, Q, S, U, W, Y, a, c light chains of Fab fragment of antibody 28F10 10090
144 3U9U 2 B, D Fab Light Chain 10090
145 3J3O 1 L C3 antibody, light chain Fab 10090
146 3J3P 1 L C3 antibody, light chain Fab 10090