Sequence Similarity Clusters for the Entities in PDB 1KEL

Entity #1 | Chains: L
28B4 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 36566
95 % 36 147 153 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 40 162 146
70 % 441 2538 1
50 % 905 5152 1
40 % 1097 5806 1
30 % 1342 7240 1
Entity #2 | Chains: H
28B4 FAB protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38832
95 % 1 2 32867 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 15 39 1053
70 % 442 2497 2
50 % 906 5152 1
40 % 1098 5806 1
30 % 1343 7240 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures