Sequence Similarity Clusters for the Entities in PDB 1KEL

Entity #1 | Chains: L
28B4 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38275
95 % 36 147 176 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 40 162 155
70 % 468 2696 1
50 % 962 5473 1
40 % 1160 6175 1
30 % 1409 7653 1
Entity #2 | Chains: H
28B4 FAB protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40589
95 % 1 2 34300 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 15 39 1124
70 % 470 2655 2
50 % 963 5473 1
40 % 1161 6175 1
30 % 1410 7653 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures