Sequence Similarity Clusters for the Entities in PDB 1KEL

Entity #1 | Chains: L
28B4 FAB protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41463
95 % 36 148 148 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 40 158 146
70 % 418 2426 1
50 % 856 4913 1
40 % 856 4913 1
30 % 928 5780 1
Entity #2 | Chains: H
28B4 FAB protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41362
95 % 1 2 31562 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.2
PDBFlex
90 % 15 39 1037
70 % 418 2376 2
50 % 857 4913 1
40 % 857 4913 1
30 % 929 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures