Sequence Similarity Clusters for the Entities in PDB 1KEG

Entity #1 | Chains: A
5'-D(*TP*(64T)P*TP*T)-3' dna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: L
Anti-(6-4) photoproduct antibody 64M-2 Fab (light chain) protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40571
95 % 87 146 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 95 156 148
70 % 1070 2329 1
50 % 2186 4717 1
40 % 2186 4717 1
30 % 2479 5571 1
Entity #3 | Chains: H
Anti-(6-4) photoproduct antibody 64M-2 Fab (heavy chain) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40263
95 % 2 2 30814 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 4 9 7019
70 % 1059 2282 2
50 % 2187 4717 1
40 % 2187 4717 1
30 % 2480 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.