Sequence Similarity Clusters for the Entities in PDB 1KEF

Entity #1 | Chains: A
synapse associated protein-90 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 16055
95 % 5 5 15047
90 % 6 6 13120
70 % 10 10 3828
50 % 28 29 1127
40 % 184 189 159
30 % 295 300 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures