Sequence Similarity Clusters for the Entities in PDB 1KEE

Entity #1 | Chains: A,C,E,G
Carbamoyl-phosphate synthetase large chain protein, length: 1073 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 1500
95 % 7 10 1297 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.3
PDBFlex
90 % 7 10 1323
70 % 7 10 1345
50 % 7 10 1392
40 % 7 10 1401
30 % 7 10 1382
Entity #2 | Chains: B,D,F,H
Carbamoyl-phosphate synthetase small chain protein, length: 382 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 8152
95 % 7 10 1316 Flexibility: No
Max RMSD: 1.2, Avg RMSD: 0.4
PDBFlex
90 % 7 10 1341
70 % 7 10 1358
50 % 7 10 1410
40 % 7 10 1423
30 % 7 10 1397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.