Sequence Similarity Clusters for the Entities in PDB 1KDY

Entity #1 | Chains: A
SERINE-CARBOXYL PROTEINASE protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 6959
95 % 3 9 7526 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 3 9 7478
70 % 3 9 7296
50 % 3 9 6716
40 % 3 9 6248
30 % 3 21 2071
Entity #2 | Chains: B
AIPF PEPTIDE INHIBITOR protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.