Sequence Similarity Clusters for the Entities in PDB 1KDV

Entity #1 | Chains: A
SERINE-CARBOXYL PROTEINASE protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 7875
95 % 2 9 8124 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 9 8061
70 % 2 9 7775
50 % 2 9 6986
40 % 2 9 6586
30 % 2 21 2130
Entity #2 | Chains: B
AIAF PEPTIDE INHIBITOR protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures