Sequence Similarity Clusters for the Entities in PDB 1KDT

Entity #1 | Chains: A,B
CYTIDYLATE KINASE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 7145
95 % 4 8 5726 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.7
PDBFlex
90 % 4 8 5735
70 % 4 8 5626
50 % 4 8 5304
40 % 5 13 2607
30 % 9 18 2009

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.