Sequence Similarity Clusters for the Entities in PDB 1KDT

Entity #1 | Chains: A,B
CYTIDYLATE KINASE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 7058
95 % 4 8 5636 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.6
PDBFlex
90 % 4 8 5644
70 % 4 8 5546
50 % 4 8 5228
40 % 5 13 2574
30 % 9 18 1994

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.