Sequence Similarity Clusters for the Entities in PDB 1KDR

Entity #1 | Chains: A,B
CYTIDYLATE KINASE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 7213
95 % 6 8 5786 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.4
PDBFlex
90 % 6 8 5797
70 % 6 8 5679
50 % 6 8 5352
40 % 7 13 2626
30 % 12 18 2022

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.